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A novel spatial and stochastic model to evaluate the within and between farm transmission of classical swine fever virus: II Validation of the model

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2012
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Martínez López, Beatriz
Ivorra, Benjamin
Ramos del Olmo, Ángel Manuel
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Elsevier
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A new, recently published, stochastic and spatial model for the evaluation of classical swine fever virus (CSFV) spread into Spain has been validated by using several methods. Internal validity, sensitivity analysis, validation using historical data, comparison with other models and experiments on data validity were used to evaluate the overall reliability and robustness of the model. More than 100 modifications in input data and parameters were evaluated. Outputs were obtained after 1000 iterations for each new scenario of the model. As a result, the model was shown to be robust, being the probability of infection by local spread, the time from infectious to clinical signs state, the probability of detection based on clinical signs at day t after detection of the index case outside the control and surveillance zones and the maximum number of farms to be depopulated at day t the parameters that more influence (>10% of change) on the magnitude and duration of the epidemic. The combination of a within- and between- farm spread model was also shown to give significantly different results than using a purely between-farm spread model. Methods and results presented here were intended to be useful to better understand and apply the model, to identify key parameters for which it will be critical to have good estimates and to provide better support for prevention and control of future CSFV outbreaks.
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AIAA (American Institute of Aeronautics and Astronautics), 1998. Guide for the Verification and Validation of Computational Fluid Dynamics Simulations. AIAA-G-077-1998, Reston, VA. Aitken, A.C, 1957. Statistical mathematics. Oliver & Boyd; 8th Revised edition. Anderson, R.M., May, R.M., 1979. Population biology of infectious diseases: Part I. Nature. 280: 361-367. Anderson, R.M., May, R.M., 1991. Infectious Diseases of Humans. Oxford, U.K.: Oxford University Press. Brauer, F., Castillo-Chavez, C., 2001. Mathematical Models in Population Biology and Epidemiology. Springer. Chitnis N., Hyman J.M., Cushing J.M., 2008. Determining important parameters in the spread of malaria through the sensitivity analysis of a mathematical model. Bull Math Biol 2008, 70, 1272-1296 DeAngelis, D.L., Gross L.J. (Editors), 1991. Individual-based Models and Approaches in Ecology. Chapman and Hall, NY. Del Pozo, M. 2006. Estudio del brote de peste porcina clásica ocurrido en Castilla y León en los años 1997-1998 [Study of the classical swine fever epidemic occurred in 1997-1998 in Castile and Leon]. PhD tesis. Dubé, C., Stevenson, M., Garner, M., Sanson, R., Corso, B., Harveyl, N., Griffin, J., Wilesmith, J., Estrada. C., 2007. A comparison of predictions made by three simulation models of foot-and-mouth disease. New Zealand Veterinary Journal, 55, 280–288. Elbers, A.T.W., Stegeman, A., Moser, H., Ekker, H.M., Smak, J.A., Pluimers, H., 1999. The classical swine fever epidemic 1997-1998 in the Netherlands: descriptive epidemiology. Prev. Vet. Med., 42, 157-184. Ezanno P, Fourichon C, Viet AF, Seegers H., 2007. Sensitivity analysis to identify key-parameters in modelling the spread of bovine viral diarrhoea virus in a dairy herd. Prev Vet Med. 80, 49-64. Hess G.D., Garner M.G., Yang X. 2008. A sensitivity analysis of an integrated modelling approach to assess the risk of wind-borne spread of foot-and-mouth disease virus from infected premises. Environ. Model. Assess.13, 209–220. Infante, J.A., Ivorra, B., Ramos, A.M., Rey, J.M., 2009. On the Modelling and Simulation of High Pressure Processes and Inactivation of Enzymes in Food Engineering. Mathematical Models and Methods in Applied Sciences, 19, 2203-2229. Ivorra, B., Martínez-López, B., Sánchez-Vizcaíno, J.M., Ramos, A.M., 2011 (submitted). Modeling and simulation of Classical Swine Fever Virus spread between and within farms. Annals of Operations Research. In press. Ivorra, B., Mohammadi, B., Ramos, A.M., 2009. Optimization strategies in credit portfolio management, Journal Of Global Optimization, 43, 415-427. Jalvingh, A.W., Nielen, M., Maurice, H., Stegeman, A.J., Elbers, A.R.W., Dijkhuizen, A.A., 1999. Spatial and stochastic simulation to evaluate the impact of events and control measures on the 1997-1998 classical swine fever epidemic in The Netherlands. I. Description of simulation model. Prev. Vet. Med, 42, 271-295. Karsten, S., Rave, G., Krieter, J., 2005a. Monte Carlo simulation of classical swine fever epidemics and control: I. General concepts and description of the model. Vet. Microb., 108, 187-198. Karsten, S., Rave, G., Krieter, J., 2005b. Monte Carlo simulation of classical swine fever epidemics and control: II. Validation of the model. Vet. Microb., 108, 199-205. Klinkenberg, D., De Bree, J., Laevens, H., De Jong, M.C.M., 2002. Within and between-pen transmission of Classical Swine Fever Virus: a new method to estimate the basic reproduction ration from transmission experiments. Epidemiol. Infect. 128, 293–299. Kopec, J.A., Finès, P., Manuel, D.G., Buckeridge, D.L., Flanagan, W.M., Oderkirk, J., Abrahamowick, M., Harper, S., Sharif, B., Okhmatovskaia, A., Sayre, E.C., Rahman, M.M., Wolfson, M., 2010. Validation of population-based disease simulation models: a review of concepts and methods. doi:10.1186/1471-2458-10-710. BMC Public Health, 10:710. Martínez-López, B., Del Pozo, M., Sánchez-Vizcaíno, J.M., 2007. Spatial analysis and modeling of Classical Swine Fever outbreaks during 1997 in the Spanish Province of Segovia. GisVet proceedings. Martínez-López, B., Ivorra, B., Ramos, A.M., Sánchez-Vizcaíno, J.M., 2011. A novel spatial and stochastic model to evaluate the within- and between-farm transmission of classical swine fever virus. I. General concepts and description of the model. Vet. Microb., 147, 300–309. Martínez-López, B., Perez A.M., Sánchez-Vizcaíno J.M., 2010. A simulation model for the potential spread of foot-and-mouth disease in the Castile and Leon region of Spain. Prev Vet Med. 96, 19-29. Nielen, M., Jalvingh, A.W., Meuwissen, M.P.M, Horst, S.H., Dijkhuizen, A.A., 1999. Spatial and stochastic simulation to evaluate the impact of events and control measures on the 1997-1998 classical swine fever epidemic in The Netherlands. II. Comparison of control strategies. Prev Vet Med 42, 297-317. Saatkamp,H.W., Huirne, R.B.M., Geers, R., Dijkhuizen, A.A., Noordhuizen, J.P.T.M., Goedseels, V., 1996. State-Transition Modelling of Classical Swine Fever to Evaluate National Identification and Recording Systems -General Aspects and Model Description. Agricultural Systems, 51, 215-236. Saltelli, A., Ratto, M., Andres, T., Campolongo, F., Cariboni, J., Gatelli, D. Saisana, M., and Tarantola, S., 2008, Global Sensitivity Analysis. The Primer, John Wiley & Sons. Sargent, R.G. 1998. Verification and validation of simulation models. Proceedings of the 1998 Winter Simulation Conference. Sargent, R.G., 2001. Some approaches and paradigms for verifying and validating simulation models. Proceedings of the 2001 Winter Simulation Conference. Stegeman, J.A., Elbers, A.R.W., Smak, J., De Jong, M.C.M., 1999. Quantification of the transmission of classical swine fever virus between herds during the 1997-1998 epidemic in The Netherlands. Prev. Vet. Med. 42, 219-234 Stegeman, J.A., Elbers, A.R.W., Bouma, A., De Jong, M.C.M., 2002. Rate of inter-farm transmission of classical swine fever virus by different types of contact during the 1997-8 epidemic in The Netherlands. Epidemiol. Infect., 128, 285-291. Tracker, B.H., Doebling, S.W., Hemez, F.M., Anderson, M.C., Pepin, J.E., Rodriguez, E.A., 2004. Concepts of Model Verification and Validation. Ed. Los Alamos, National Laboratory. LA-14167-MS.
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