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Strepsiptera, phylogenomics and the long branch attraction problem

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Boussau, Bastien and Walton, Zaak and Delgado Sáez, Juan Antonio and Collantes, Francisco and Beani, Laura and Stewart, Isaac J. and Cameron, Sydney A. and Whitfield, James B. and Johnston, J. Spencer and Holland, Peter W.H. and Bachtrog, Doris and Kathirithamby, Jeyaraney and Huelsenbeck, John P. (2014) Strepsiptera, phylogenomics and the long branch attraction problem. PLoS ONE, 9 (10). pp. 1-9. ISSN ESSN: 1932-6203

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Official URL: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0107709



Abstract

Insect phylogeny has recently been the focus of renewed interest as advances in sequencing techniques make it possible to rapidly generate large amounts of genomic or transcriptomic data for a species of interest. However, large numbers of markers are not sufficient to guarantee accurate phylogenetic reconstruction, and the choice of the model of sequence evolution as well as adequate taxonomic sampling are as important for phylogenomic studies as they are for single-gene phylogenies. Recently, the sequence of the genome of a strepsipteran has been published and used to place Strepsiptera as sister group to Coleoptera. However, this conclusion relied on a data set that did not include representatives of Neuropterida or of coleopteran lineages formerly proposed to be related to Strepsiptera. Furthermore, it did not use models that are robust against the long branch attraction artifact. Here we have sequenced the transcriptomes of seven key species to complete a data set comprising 36 species to study the higher level phylogeny of insects, with a particular focus on Neuropteroidea (Coleoptera, Strepsiptera, Neuropterida), especially on coleopteran taxa considered as potential close relatives of Strepsiptera. Using models robust against the long branch attraction artifact we find a highly resolved phylogeny that confirms the position of Strepsiptera as a sister group to Coleoptera, rather than as an internal clade of Coleoptera, and sheds new light onto the phylogeny of Neuropteroidea.


Item Type:Article
Uncontrolled Keywords:Strepsiptera; Phylogenomics
Subjects:Medical sciences > Biology > Insects
ID Code:47781
Deposited On:29 May 2018 07:54
Last Modified:29 May 2018 07:54

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